Genome annotation and inferring function
Hubbard Center for Genome Studies (HCGS)
Genome annotation and inferring function
12:32
Sequencing and assembling a genome
Hubbard Center for Genome Studies (HCGS)
Sequencing and assembling a genome
25:42
Data structures and conventions
Hubbard Center for Genome Studies (HCGS)
Data structures and conventions
15:43
Generation of genomic data: NGS sequencing
Hubbard Center for Genome Studies (HCGS)
Generation of genomic data: NGS sequencing
28:57
Principles of Genomics
Hubbard Center for Genome Studies (HCGS)
Principles of Genomics
10:10
Introduction to Genomics and Bioinformatics modules
Hubbard Center for Genome Studies (HCGS)
Introduction to Genomics and Bioinformatics modules
7:39
Module 9: Redirecting Standard Out (pipe)
Hubbard Center for Genome Studies (HCGS)
Module 9: Redirecting Standard Out (pipe)
15:41
Module 8: Search and Manipulate Files (grep)
Hubbard Center for Genome Studies (HCGS)
Module 8: Search and Manipulate Files (grep)
16:43
Module 12: .bashrc
Hubbard Center for Genome Studies (HCGS)
Module 12: .bashrc
6:09
Module 13: File Permissions
Hubbard Center for Genome Studies (HCGS)
Module 13: File Permissions
12:10
Module 14: Shell Scripts
Hubbard Center for Genome Studies (HCGS)
Module 14: Shell Scripts
13:26
Module 15: Nohup
Hubbard Center for Genome Studies (HCGS)
Module 15: Nohup
10:21
Module 16: Trim Reads w/ Trimmomatic
Hubbard Center for Genome Studies (HCGS)
Module 16: Trim Reads w/ Trimmomatic
13:10
Module 17: Genome Assembly w/ SPAdes
Hubbard Center for Genome Studies (HCGS)
Module 17: Genome Assembly w/ SPAdes
9:11
Module 18: Assembly Metrics w/ QUAST
Hubbard Center for Genome Studies (HCGS)
Module 18: Assembly Metrics w/ QUAST
5:31
Module 19: Annotate a Genome w/ Prokka
Hubbard Center for Genome Studies (HCGS)
Module 19: Annotate a Genome w/ Prokka
8:35
Module 10: Wildcards and Globbing
Hubbard Center for Genome Studies (HCGS)
Module 10: Wildcards and Globbing
13:03
Module 11: Variables and Parameter Substitutions
Hubbard Center for Genome Studies (HCGS)
Module 11: Variables and Parameter Substitutions
6:38
Module 7a: Edit and View Files w/ Nano
Hubbard Center for Genome Studies (HCGS)
Module 7a: Edit and View Files w/ Nano
5:30
Module 6: Odds and Ends
Hubbard Center for Genome Studies (HCGS)
Module 6: Odds and Ends
7:52
Module 5: Move, Copy, and Delete
Hubbard Center for Genome Studies (HCGS)
Module 5: Move, Copy, and Delete
14:11
Module 4: Moving Around
Hubbard Center for Genome Studies (HCGS)
Module 4: Moving Around
10:27
Module 3: Pathways and Directories
Hubbard Center for Genome Studies (HCGS)
Module 3: Pathways and Directories
6:21
Module 2: Finding Help
Hubbard Center for Genome Studies (HCGS)
Module 2: Finding Help
6:42
Module 1: Anatomy of a Command
Hubbard Center for Genome Studies (HCGS)
Module 1: Anatomy of a Command
4:30
How to Use SSH to Connect to a Remote Server
Hubbard Center for Genome Studies (HCGS)
How to Use SSH to Connect to a Remote Server
5:57